Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gm12620-201ENSMUST00000119791 1986 ntBASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gm12612-201ENSMUST00000140182 1986 ntBASIC13□□□□□ -0.33
Vps13aQ5H8C4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gm6447-201ENSMUST00000118905 835 ntBASIC13□□□□□ -0.33
Vps13aQ5H8C4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13□□□□□ -0.33
Vps13aQ5H8C4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13□□□□□ -0.33
Vps13aQ5H8C4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13□□□□□ -0.33
Vps13aQ5H8C4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13□□□□□ -0.33
Vps13aQ5H8C4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps13aQ5H8C4 AC140375.1-201ENSMUST00000225421 694 ntBASIC13□□□□□ -0.33
Vps13aQ5H8C4 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vps13aQ5H8C4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gm17889-201ENSMUST00000198410 598 ntBASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.99□□□□□ -0.33
Vps13aQ5H8C4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gm12015-201ENSMUST00000117065 843 ntBASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps13aQ5H8C4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms