Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.95□□□□□ -0.18
Trim80Q3V061 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim80Q3V061 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim80Q3V061 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.94□□□□□ -0.18
Trim80Q3V061 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim80Q3V061 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.94□□□□□ -0.18
Trim80Q3V061 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim80Q3V061 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim80Q3V061 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim80Q3V061 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim80Q3V061 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.94□□□□□ -0.18
Trim80Q3V061 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim80Q3V061 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim80Q3V061 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.93□□□□□ -0.18
Trim80Q3V061 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim80Q3V061 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.93□□□□□ -0.18
Trim80Q3V061 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim80Q3V061 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.93□□□□□ -0.18
Trim80Q3V061 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.93□□□□□ -0.18
Trim80Q3V061 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim80Q3V061 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Gm11424-201ENSMUST00000121929 829 ntBASIC13.93□□□□□ -0.18
Trim80Q3V061 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.93□□□□□ -0.18
Trim80Q3V061 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trim80Q3V061 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trim80Q3V061 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Gm17837-201ENSMUST00000186435 985 ntBASIC13.93□□□□□ -0.18
Trim80Q3V061 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.93□□□□□ -0.18
Trim80Q3V061 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim80Q3V061 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.93□□□□□ -0.18
Trim80Q3V061 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim80Q3V061 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim80Q3V061 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Gm12151-201ENSMUST00000121374 290 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms