Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Shd-206ENSMUST00000225145 998 ntBASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc27Q3V036 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc27Q3V036 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gm14701-201ENSMUST00000117156 348 ntBASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gm15653-201ENSMUST00000119247 907 ntBASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gm27533-201ENSMUST00000183800 152 ntBASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gm33320-201ENSMUST00000192232 530 ntBASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.16■□□□□ 0.34
Ccdc27Q3V036 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.15■□□□□ 0.34
Ccdc27Q3V036 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc27Q3V036 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms