Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm29310-201ENSMUST00000185468 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21825-201ENSMUST00000185728 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm29109-201ENSMUST00000185895 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21896-201ENSMUST00000186520 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21873-201ENSMUST00000186728 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21794-201ENSMUST00000187056 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21880-201ENSMUST00000187275 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21826-201ENSMUST00000187451 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21198-201ENSMUST00000188393 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21749-201ENSMUST00000189343 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21901-201ENSMUST00000189568 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm29424-201ENSMUST00000189716 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm28599-201ENSMUST00000189838 694 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21867-201ENSMUST00000189917 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm29269-201ENSMUST00000190087 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21722-201ENSMUST00000190153 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm28423-201ENSMUST00000190701 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21899-201ENSMUST00000190745 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21910-201ENSMUST00000191163 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21849-201ENSMUST00000191571 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm28678-201ENSMUST00000191593 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm20910-201ENSMUST00000193268 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm21871-201ENSMUST00000194621 696 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm6443-201ENSMUST00000203599 874 ntBASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim40Q3UWA4 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.59□□□□□ -0.39
Trim40Q3UWA4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms