Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Khdc4Q3TCX3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Gm13385-201ENSMUST00000121089 220 ntBASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Gm8927-201ENSMUST00000181978 981 ntBASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Gm3222-201ENSMUST00000071282 990 ntBASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Khdc4Q3TCX3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm12390-201ENSMUST00000117897 397 ntBASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm15429-201ENSMUST00000151268 798 ntBASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Gm19078-201ENSMUST00000206311 727 ntBASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Khdc4Q3TCX3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms