Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.23□□□□□ -0.29
Q3KNL4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.23□□□□□ -0.29
Q3KNL4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Q3KNL4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Q3KNL4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Q3KNL4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.23□□□□□ -0.29
Q3KNL4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.23□□□□□ -0.29
Q3KNL4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.23□□□□□ -0.29
Q3KNL4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Q3KNL4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.23□□□□□ -0.29
Q3KNL4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Gm44344-201ENSMUST00000200287 129 ntBASIC13.23□□□□□ -0.29
Q3KNL4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Q3KNL4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Q3KNL4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Q3KNL4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Q3KNL4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Q3KNL4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Gm12585-201ENSMUST00000117307 290 ntBASIC13.22□□□□□ -0.29
Q3KNL4 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.22□□□□□ -0.29
Q3KNL4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.22□□□□□ -0.29
Q3KNL4 Gm3436-201ENSMUST00000179930 840 ntBASIC13.22□□□□□ -0.29
Q3KNL4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.22□□□□□ -0.29
Q3KNL4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.22□□□□□ -0.29
Q3KNL4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.22□□□□□ -0.29
Q3KNL4 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.22□□□□□ -0.29
Q3KNL4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.22□□□□□ -0.29
Q3KNL4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Q3KNL4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Q3KNL4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Q3KNL4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Q3KNL4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Q3KNL4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.21□□□□□ -0.29
Q3KNL4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Q3KNL4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.21□□□□□ -0.29
Q3KNL4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Q3KNL4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Q3KNL4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Q3KNL4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms