Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm22661-201ENSMUST00000104192 132 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm23680-201ENSMUST00000083162 164 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm22146-201ENSMUST00000157397 288 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 AC154361.2-201ENSMUST00000224747 943 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 AC154572.1-201ENSMUST00000226098 1204 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm15626-201ENSMUST00000117478 868 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm13351-201ENSMUST00000118087 414 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm4462-201ENSMUST00000166453 492 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm6390-201ENSMUST00000215034 589 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm11949-201ENSMUST00000117640 372 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm43912-201ENSMUST00000204352 538 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm45410-201ENSMUST00000211331 1093 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 AC154257.1-202ENSMUST00000224729 843 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm6641-201ENSMUST00000196100 1315 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm12986-201ENSMUST00000119037 967 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm23085-201ENSMUST00000157849 293 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Gm17214-201ENSMUST00000164501 541 ntBASIC6.9□□□□□ -1.3
Ush2AQ2QI47 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms