Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Gm5187-201ENSMUST00000117317 991 ntBASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Gm7809-201ENSMUST00000153199 742 ntBASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Gm43133-201ENSMUST00000197472 463 ntBASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Znf541Q0GGX2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm12957-201ENSMUST00000117835 377 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm16296-201ENSMUST00000159905 325 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm16379-201ENSMUST00000161469 348 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm38002-201ENSMUST00000193255 180 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm8762-201ENSMUST00000193486 339 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm38092-201ENSMUST00000195600 653 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.88■□□□□ 0.29
Znf541Q0GGX2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Gm13813-201ENSMUST00000120998 787 ntBASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Gm17208-201ENSMUST00000168388 535 ntBASIC16.87■□□□□ 0.29
Znf541Q0GGX2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Gm19309-201ENSMUST00000218295 205 ntBASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Gm5781-201ENSMUST00000219792 443 ntBASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Znf541Q0GGX2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms