Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox4Q06831 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sox4Q06831 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.23□□□□□ -0.29
Sox4Q06831 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox4Q06831 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.23□□□□□ -0.29
Sox4Q06831 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox4Q06831 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sox4Q06831 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sox4Q06831 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.22□□□□□ -0.29
Sox4Q06831 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.22□□□□□ -0.29
Sox4Q06831 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.22□□□□□ -0.29
Sox4Q06831 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.22□□□□□ -0.29
Sox4Q06831 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox4Q06831 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.22□□□□□ -0.29
Sox4Q06831 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.22□□□□□ -0.29
Sox4Q06831 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox4Q06831 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox4Q06831 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.21□□□□□ -0.29
Sox4Q06831 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox4Q06831 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.21□□□□□ -0.29
Sox4Q06831 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox4Q06831 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Sox4Q06831 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Gm6244-201ENSMUST00000178732 841 ntBASIC13.21□□□□□ -0.29
Sox4Q06831 Gm27892-201ENSMUST00000185017 106 ntBASIC13.21□□□□□ -0.29
Sox4Q06831 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox4Q06831 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox4Q06831 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox4Q06831 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox4Q06831 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sox4Q06831 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Sox4Q06831 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox4Q06831 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox4Q06831 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Sox4Q06831 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.21□□□□□ -0.3
Sox4Q06831 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.21□□□□□ -0.3
Sox4Q06831 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.21□□□□□ -0.3
Sox4Q06831 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.2□□□□□ -0.3
Sox4Q06831 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms