Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn1bP97952 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn1bP97952 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Matn2-203ENSMUST00000226766 3252 ntBASIC12.28□□□□□ -0.44
Scn1bP97952 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scn1bP97952 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.28□□□□□ -0.44
Scn1bP97952 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Scn1bP97952 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Scn1bP97952 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Gm12882-201ENSMUST00000121696 517 ntBASIC12.28□□□□□ -0.44
Scn1bP97952 Gm5177-201ENSMUST00000183092 997 ntBASIC12.28□□□□□ -0.44
Scn1bP97952 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.28□□□□□ -0.44
Scn1bP97952 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.28□□□□□ -0.44
Scn1bP97952 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Scn1bP97952 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn1bP97952 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.28□□□□□ -0.44
Scn1bP97952 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1bP97952 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1bP97952 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Scn1bP97952 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Scn1bP97952 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1bP97952 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1bP97952 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1bP97952 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn1bP97952 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.27□□□□□ -0.44
Scn1bP97952 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.27□□□□□ -0.45
Scn1bP97952 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Scn1bP97952 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Gm5364-201ENSMUST00000216789 889 ntBASIC12.27□□□□□ -0.45
Scn1bP97952 Psmb5-202ENSMUST00000227257 622 ntBASIC12.27□□□□□ -0.45
Scn1bP97952 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Scn1bP97952 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.27□□□□□ -0.45
Scn1bP97952 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.27□□□□□ -0.45
Scn1bP97952 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.27□□□□□ -0.45
Scn1bP97952 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn1bP97952 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.26□□□□□ -0.45
Scn1bP97952 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Gm9385-201ENSMUST00000117563 472 ntBASIC12.26□□□□□ -0.45
Scn1bP97952 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.26□□□□□ -0.45
Scn1bP97952 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.26□□□□□ -0.45
Scn1bP97952 Gm44608-201ENSMUST00000206827 855 ntBASIC12.26□□□□□ -0.45
Scn1bP97952 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.26□□□□□ -0.45
Scn1bP97952 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.26□□□□□ -0.45
Scn1bP97952 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1bP97952 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms