Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.53□□□□□ -0.56
Smn1P97801 Gm18889-201ENSMUST00000174284 929 ntBASIC11.53□□□□□ -0.56
Smn1P97801 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.53□□□□□ -0.56
Smn1P97801 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.53□□□□□ -0.56
Smn1P97801 Gm10175-201ENSMUST00000086013 645 ntBASIC11.53□□□□□ -0.56
Smn1P97801 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Smn1P97801 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Smn1P97801 Syt7-205ENSMUST00000224135 1557 ntBASIC11.53□□□□□ -0.56
Smn1P97801 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smn1P97801 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.53□□□□□ -0.56
Smn1P97801 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smn1P97801 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smn1P97801 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.52□□□□□ -0.56
Smn1P97801 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Smn1P97801 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.56
Smn1P97801 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smn1P97801 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.52□□□□□ -0.57
Smn1P97801 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.52□□□□□ -0.57
Smn1P97801 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.52□□□□□ -0.57
Smn1P97801 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Smn1P97801 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.52□□□□□ -0.57
Smn1P97801 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smn1P97801 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.51□□□□□ -0.57
Smn1P97801 Gm13365-201ENSMUST00000121188 973 ntBASIC11.51□□□□□ -0.57
Smn1P97801 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.51□□□□□ -0.57
Smn1P97801 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.51□□□□□ -0.57
Smn1P97801 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.51□□□□□ -0.57
Smn1P97801 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.51□□□□□ -0.57
Smn1P97801 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.51□□□□□ -0.57
Smn1P97801 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.51□□□□□ -0.57
Smn1P97801 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.51□□□□□ -0.57
Smn1P97801 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.51□□□□□ -0.57
Smn1P97801 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smn1P97801 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms