Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Lig3P97386 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Lig3P97386 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lig3P97386 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.72□□□□□ -0.05
Lig3P97386 Gm15460-201ENSMUST00000118147 391 ntBASIC14.72□□□□□ -0.05
Lig3P97386 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.72□□□□□ -0.05
Lig3P97386 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.72□□□□□ -0.05
Lig3P97386 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.72□□□□□ -0.05
Lig3P97386 Gm5279-201ENSMUST00000199575 745 ntBASIC14.72□□□□□ -0.05
Lig3P97386 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Lig3P97386 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lig3P97386 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lig3P97386 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.71□□□□□ -0.05
Lig3P97386 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.71□□□□□ -0.05
Lig3P97386 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Lig3P97386 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Lig3P97386 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.71□□□□□ -0.05
Lig3P97386 Gm18827-201ENSMUST00000188341 790 ntBASIC14.71□□□□□ -0.05
Lig3P97386 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.71□□□□□ -0.05
Lig3P97386 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.71□□□□□ -0.05
Lig3P97386 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.71□□□□□ -0.05
Lig3P97386 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.71□□□□□ -0.05
Lig3P97386 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.71□□□□□ -0.05
Lig3P97386 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Lig3P97386 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.71□□□□□ -0.05
Lig3P97386 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lig3P97386 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lig3P97386 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Lig3P97386 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Lig3P97386 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lig3P97386 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.71□□□□□ -0.06
Lig3P97386 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Lig3P97386 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lig3P97386 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lig3P97386 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lig3P97386 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Lig3P97386 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.7□□□□□ -0.06
Lig3P97386 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.7□□□□□ -0.06
Lig3P97386 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.7□□□□□ -0.06
Lig3P97386 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.7□□□□□ -0.06
Lig3P97386 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lig3P97386 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lig3P97386 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.7□□□□□ -0.06
Lig3P97386 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lig3P97386 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms