Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smad1P70340 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.9□□□□□ -0.18
Smad1P70340 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.9□□□□□ -0.18
Smad1P70340 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Smad1P70340 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Gm2445-201ENSMUST00000182798 989 ntBASIC13.9□□□□□ -0.18
Smad1P70340 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.9□□□□□ -0.18
Smad1P70340 Gm44608-201ENSMUST00000206827 855 ntBASIC13.9□□□□□ -0.18
Smad1P70340 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smad1P70340 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smad1P70340 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.89□□□□□ -0.19
Smad1P70340 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smad1P70340 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Mir1938-201ENSMUST00000158746 100 ntBASIC13.89□□□□□ -0.19
Smad1P70340 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.89□□□□□ -0.19
Smad1P70340 Gm37917-201ENSMUST00000194711 392 ntBASIC13.89□□□□□ -0.19
Smad1P70340 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.89□□□□□ -0.19
Smad1P70340 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smad1P70340 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.89□□□□□ -0.19
Smad1P70340 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.89□□□□□ -0.19
Smad1P70340 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Smad1P70340 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smad1P70340 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.88□□□□□ -0.19
Smad1P70340 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smad1P70340 Gm15824-201ENSMUST00000119516 955 ntBASIC13.88□□□□□ -0.19
Smad1P70340 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Gm29741-201ENSMUST00000192667 421 ntBASIC13.88□□□□□ -0.19
Smad1P70340 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.88□□□□□ -0.19
Smad1P70340 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.88□□□□□ -0.19
Smad1P70340 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Smad1P70340 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Smad1P70340 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smad1P70340 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smad1P70340 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Smad1P70340 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smad1P70340 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms