Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Mir6546-201ENSMUST00000184460 62 ntBASIC21.56■■□□□ 1.04
Cux2P70298 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Cux2P70298 Gm21027-201ENSMUST00000219300 1236 ntBASIC21.56■■□□□ 1.04
Cux2P70298 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC21.56■■□□□ 1.04
Cux2P70298 Gm42918-201ENSMUST00000199249 1580 ntBASIC21.56■■□□□ 1.04
Cux2P70298 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cux2P70298 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cux2P70298 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cux2P70298 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cux2P70298 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cux2P70298 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Gm23949-201ENSMUST00000104027 127 ntBASIC21.55■■□□□ 1.04
Cux2P70298 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Cux2P70298 AC159205.5-202ENSMUST00000224849 386 ntBASIC21.55■■□□□ 1.04
Cux2P70298 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cux2P70298 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC21.55■■□□□ 1.04
Cux2P70298 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Cux2P70298 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Cux2P70298 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC21.55■■□□□ 1.04
Cux2P70298 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cux2P70298 Gm7666-201ENSMUST00000146631 819 ntBASIC21.55■■□□□ 1.04
Cux2P70298 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cux2P70298 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC21.55■■□□□ 1.04
Cux2P70298 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
Cux2P70298 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Cux2P70298 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cux2P70298 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC21.54■■□□□ 1.04
Cux2P70298 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 AC159308.2-201ENSMUST00000213592 2325 ntBASIC21.54■■□□□ 1.04
Cux2P70298 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Cux2P70298 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Gm13035-201ENSMUST00000117496 342 ntBASIC21.54■■□□□ 1.04
Cux2P70298 Gm15711-201ENSMUST00000118889 535 ntBASIC21.54■■□□□ 1.04
Cux2P70298 Gm14460-201ENSMUST00000121511 639 ntBASIC21.54■■□□□ 1.04
Cux2P70298 Gm18893-201ENSMUST00000198416 943 ntBASIC21.54■■□□□ 1.04
Cux2P70298 AY036118-201ENSMUST00000200021 923 ntBASIC21.54■■□□□ 1.04
Cux2P70298 Gm4607-201ENSMUST00000206649 577 ntBASIC21.54■■□□□ 1.04
Cux2P70298 AC099645.1-201ENSMUST00000226476 1105 ntBASIC21.54■■□□□ 1.04
Cux2P70298 AC108416.1-202ENSMUST00000228927 1201 ntBASIC21.54■■□□□ 1.04
Cux2P70298 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cux2P70298 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Cux2P70298 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC21.53■■□□□ 1.04
Cux2P70298 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Cux2P70298 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cux2P70298 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cux2P70298 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC21.53■■□□□ 1.04
Cux2P70298 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cux2P70298 Mir680-2-201ENSMUST00000102163 110 ntBASIC21.53■■□□□ 1.04
Cux2P70298 Gm23251-201ENSMUST00000103773 110 ntBASIC21.53■■□□□ 1.04
Cux2P70298 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC21.53■■□□□ 1.04
Cux2P70298 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
Cux2P70298 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cux2P70298 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cux2P70298 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
Cux2P70298 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Cux2P70298 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Gm14058-201ENSMUST00000116082 735 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm14999-201ENSMUST00000121039 624 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms