Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.32□□□□□ -0.28
Crnkl1P63154 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.32□□□□□ -0.28
Crnkl1P63154 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.32□□□□□ -0.28
Crnkl1P63154 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Gm11745-201ENSMUST00000121669 448 ntBASIC13.32□□□□□ -0.28
Crnkl1P63154 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Gm20553-201ENSMUST00000204205 844 ntBASIC13.32□□□□□ -0.28
Crnkl1P63154 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.32□□□□□ -0.28
Crnkl1P63154 Chchd1-203ENSMUST00000224633 557 ntBASIC13.32□□□□□ -0.28
Crnkl1P63154 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Crnkl1P63154 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Crnkl1P63154 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Crnkl1P63154 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Gm18057-201ENSMUST00000208220 503 ntBASIC13.31□□□□□ -0.28
Crnkl1P63154 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.31□□□□□ -0.28
Crnkl1P63154 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.31□□□□□ -0.28
Crnkl1P63154 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Crnkl1P63154 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.31□□□□□ -0.28
Crnkl1P63154 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.31□□□□□ -0.28
Crnkl1P63154 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Crnkl1P63154 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.3□□□□□ -0.28
Crnkl1P63154 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Crnkl1P63154 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.3□□□□□ -0.28
Crnkl1P63154 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.3□□□□□ -0.28
Crnkl1P63154 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.3□□□□□ -0.28
Crnkl1P63154 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Crnkl1P63154 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Crnkl1P63154 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Crnkl1P63154 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Crnkl1P63154 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Crnkl1P63154 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Crnkl1P63154 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms