Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.58□□□□□ -0.88
Rpl39P62892 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpl39P62892 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC9.57□□□□□ -0.88
Rpl39P62892 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.57□□□□□ -0.88
Rpl39P62892 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC9.57□□□□□ -0.88
Rpl39P62892 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Rpl39P62892 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Rpl39P62892 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Rpl39P62892 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm18737-201ENSMUST00000173594 937 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 Gm43073-201ENSMUST00000198200 1189 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 Gm2651-201ENSMUST00000203560 838 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 Gm20553-201ENSMUST00000204205 844 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC9.57□□□□□ -0.88
Rpl39P62892 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Mir497b-201ENSMUST00000093601 125 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Rpl39P62892 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Rpl39P62892 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Rpl39P62892 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.57□□□□□ -0.88
Rpl39P62892 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.57□□□□□ -0.88
Rpl39P62892 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpl39P62892 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.56□□□□□ -0.88
Rpl39P62892 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.56□□□□□ -0.88
Rpl39P62892 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.56□□□□□ -0.88
Rpl39P62892 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.56□□□□□ -0.88
Rpl39P62892 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Rpl39P62892 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rpl39P62892 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.56□□□□□ -0.88
Rpl39P62892 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Rpl39P62892 Gm2810-201ENSMUST00000118681 990 ntBASIC9.56□□□□□ -0.88
Rpl39P62892 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.56□□□□□ -0.88
Rpl39P62892 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.56□□□□□ -0.88
Rpl39P62892 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.56□□□□□ -0.88
Rpl39P62892 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms