Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.31□□□□□ -0.28
Pdx1P52946 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.31□□□□□ -0.28
Pdx1P52946 Gm18018-201ENSMUST00000198273 408 ntBASIC13.31□□□□□ -0.28
Pdx1P52946 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.31□□□□□ -0.28
Pdx1P52946 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.31□□□□□ -0.28
Pdx1P52946 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.31□□□□□ -0.28
Pdx1P52946 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.31□□□□□ -0.28
Pdx1P52946 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pdx1P52946 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Pdx1P52946 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pdx1P52946 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.31□□□□□ -0.28
Pdx1P52946 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pdx1P52946 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.3□□□□□ -0.28
Pdx1P52946 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pdx1P52946 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pdx1P52946 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pdx1P52946 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pdx1P52946 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pdx1P52946 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Gm12091-201ENSMUST00000146791 830 ntBASIC13.3□□□□□ -0.28
Pdx1P52946 Gm42550-201ENSMUST00000201553 960 ntBASIC13.3□□□□□ -0.28
Pdx1P52946 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.3□□□□□ -0.28
Pdx1P52946 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pdx1P52946 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Pdx1P52946 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.3□□□□□ -0.28
Pdx1P52946 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdx1P52946 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Pdx1P52946 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pdx1P52946 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Pdx1P52946 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.29□□□□□ -0.28
Pdx1P52946 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdx1P52946 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Pdx1P52946 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.29□□□□□ -0.28
Pdx1P52946 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.29□□□□□ -0.28
Pdx1P52946 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Pdx1P52946 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.29□□□□□ -0.28
Pdx1P52946 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pdx1P52946 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.29□□□□□ -0.28
Pdx1P52946 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.29□□□□□ -0.28
Pdx1P52946 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdx1P52946 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.28□□□□□ -0.28
Pdx1P52946 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms