Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.74□□□□□ -0.37
RoraP51448 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RoraP51448 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.74□□□□□ -0.37
RoraP51448 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RoraP51448 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RoraP51448 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.74□□□□□ -0.37
RoraP51448 Gm27847-201ENSMUST00000183711 107 ntBASIC12.74□□□□□ -0.37
RoraP51448 Gm27375-201ENSMUST00000183799 107 ntBASIC12.74□□□□□ -0.37
RoraP51448 Gm38671-201ENSMUST00000200573 130 ntBASIC12.74□□□□□ -0.37
RoraP51448 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.74□□□□□ -0.37
RoraP51448 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RoraP51448 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Gm6091-201ENSMUST00000098307 165 ntBASIC12.74□□□□□ -0.37
RoraP51448 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.74□□□□□ -0.37
RoraP51448 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
RoraP51448 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RoraP51448 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.73□□□□□ -0.37
RoraP51448 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RoraP51448 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.73□□□□□ -0.37
RoraP51448 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Gm15770-201ENSMUST00000117498 584 ntBASIC12.73□□□□□ -0.37
RoraP51448 Gm13226-201ENSMUST00000117838 404 ntBASIC12.73□□□□□ -0.37
RoraP51448 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.73□□□□□ -0.37
RoraP51448 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.73□□□□□ -0.37
RoraP51448 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.73□□□□□ -0.37
RoraP51448 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.73□□□□□ -0.37
RoraP51448 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.73□□□□□ -0.37
RoraP51448 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Gm17330-201ENSMUST00000221047 165 ntBASIC12.73□□□□□ -0.37
RoraP51448 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.73□□□□□ -0.37
RoraP51448 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.73□□□□□ -0.37
RoraP51448 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RoraP51448 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RoraP51448 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RoraP51448 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.73□□□□□ -0.37
RoraP51448 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RoraP51448 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.72□□□□□ -0.37
RoraP51448 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RoraP51448 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.72□□□□□ -0.37
RoraP51448 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RoraP51448 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms