Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox18P43680 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox18P43680 Gm24514-201ENSMUST00000174961 285 ntBASIC12.95□□□□□ -0.34
Sox18P43680 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox18P43680 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Gm21769-201ENSMUST00000211922 111 ntBASIC12.95□□□□□ -0.34
Sox18P43680 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.95□□□□□ -0.34
Sox18P43680 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.95□□□□□ -0.34
Sox18P43680 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox18P43680 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox18P43680 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox18P43680 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox18P43680 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox18P43680 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.94□□□□□ -0.34
Sox18P43680 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox18P43680 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.94□□□□□ -0.34
Sox18P43680 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.94□□□□□ -0.34
Sox18P43680 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox18P43680 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox18P43680 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.94□□□□□ -0.34
Sox18P43680 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox18P43680 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.94□□□□□ -0.34
Sox18P43680 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Gm37489-201ENSMUST00000191883 159 ntBASIC12.94□□□□□ -0.34
Sox18P43680 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox18P43680 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.94□□□□□ -0.34
Sox18P43680 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox18P43680 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.94□□□□□ -0.34
Sox18P43680 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox18P43680 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox18P43680 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Sox18P43680 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.93□□□□□ -0.34
Sox18P43680 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.93□□□□□ -0.34
Sox18P43680 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox18P43680 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Gm13369-201ENSMUST00000119442 987 ntBASIC12.93□□□□□ -0.34
Sox18P43680 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox18P43680 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.93□□□□□ -0.34
Sox18P43680 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Gm25026-201ENSMUST00000175017 188 ntBASIC12.93□□□□□ -0.34
Sox18P43680 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox18P43680 Gm37497-201ENSMUST00000195830 798 ntBASIC12.93□□□□□ -0.34
Sox18P43680 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Gm7046-201ENSMUST00000221351 977 ntBASIC12.93□□□□□ -0.34
Sox18P43680 Gm29787-201ENSMUST00000222129 849 ntBASIC12.93□□□□□ -0.34
Sox18P43680 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox18P43680 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox18P43680 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox18P43680 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.93□□□□□ -0.34
Sox18P43680 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox18P43680 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox18P43680 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms