Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.01□□□□□ -0.33
Tnfsf4P43488 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfsf4P43488 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfsf4P43488 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Gm45706-201ENSMUST00000213063 2136 ntBASIC13□□□□□ -0.33
Tnfsf4P43488 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfsf4P43488 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tnfsf4P43488 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfsf4P43488 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13□□□□□ -0.33
Tnfsf4P43488 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Gm15678-201ENSMUST00000117573 960 ntBASIC13□□□□□ -0.33
Tnfsf4P43488 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13□□□□□ -0.33
Tnfsf4P43488 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Gm3436-201ENSMUST00000179930 840 ntBASIC13□□□□□ -0.33
Tnfsf4P43488 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13□□□□□ -0.33
Tnfsf4P43488 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Tnfsf4P43488 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfsf4P43488 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13□□□□□ -0.33
Tnfsf4P43488 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfsf4P43488 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Tnfsf4P43488 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Tnfsf4P43488 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.99□□□□□ -0.33
Tnfsf4P43488 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.99□□□□□ -0.33
Tnfsf4P43488 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Gm44344-201ENSMUST00000200287 129 ntBASIC12.99□□□□□ -0.33
Tnfsf4P43488 Gm43703-201ENSMUST00000200523 763 ntBASIC12.99□□□□□ -0.33
Tnfsf4P43488 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.99□□□□□ -0.33
Tnfsf4P43488 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.99□□□□□ -0.33
Tnfsf4P43488 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Gm8396-201ENSMUST00000057361 823 ntBASIC12.99□□□□□ -0.33
Tnfsf4P43488 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms