Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Gm15371-201ENSMUST00000117057 784 ntBASIC12.89□□□□□ -0.35
Cdh4P39038 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.89□□□□□ -0.35
Cdh4P39038 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.89□□□□□ -0.35
Cdh4P39038 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.89□□□□□ -0.35
Cdh4P39038 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdh4P39038 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.89□□□□□ -0.35
Cdh4P39038 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.89□□□□□ -0.35
Cdh4P39038 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdh4P39038 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.89□□□□□ -0.35
Cdh4P39038 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdh4P39038 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Cdh4P39038 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Cdh4P39038 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.89□□□□□ -0.35
Cdh4P39038 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdh4P39038 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cdh4P39038 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cdh4P39038 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cdh4P39038 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Cdh4P39038 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cdh4P39038 Gm12490-201ENSMUST00000120255 560 ntBASIC12.88□□□□□ -0.35
Cdh4P39038 Gm11918-201ENSMUST00000121660 179 ntBASIC12.88□□□□□ -0.35
Cdh4P39038 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.88□□□□□ -0.35
Cdh4P39038 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.88□□□□□ -0.35
Cdh4P39038 Gm27701-201ENSMUST00000184498 110 ntBASIC12.88□□□□□ -0.35
Cdh4P39038 Gm38223-201ENSMUST00000194484 695 ntBASIC12.88□□□□□ -0.35
Cdh4P39038 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdh4P39038 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.88□□□□□ -0.35
Cdh4P39038 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cdh4P39038 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cdh4P39038 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cdh4P39038 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cdh4P39038 Matn2-206ENSMUST00000228570 2798 ntBASIC12.88□□□□□ -0.35
Cdh4P39038 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdh4P39038 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cdh4P39038 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh4P39038 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.87□□□□□ -0.35
Cdh4P39038 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.87□□□□□ -0.35
Cdh4P39038 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Gm28911-201ENSMUST00000188837 117 ntBASIC12.87□□□□□ -0.35
Cdh4P39038 Gm42550-201ENSMUST00000201553 960 ntBASIC12.87□□□□□ -0.35
Cdh4P39038 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.87□□□□□ -0.35
Cdh4P39038 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cdh4P39038 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.87□□□□□ -0.35
Cdh4P39038 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Cdh4P39038 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh4P39038 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms