Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.81□□□□□ -0.52
Upk2P38575 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Upk2P38575 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.81□□□□□ -0.52
Upk2P38575 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.81□□□□□ -0.52
Upk2P38575 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.81□□□□□ -0.52
Upk2P38575 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.81□□□□□ -0.52
Upk2P38575 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Upk2P38575 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Upk2P38575 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk2P38575 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk2P38575 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.8□□□□□ -0.52
Upk2P38575 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk2P38575 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.8□□□□□ -0.52
Upk2P38575 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.8□□□□□ -0.52
Upk2P38575 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.8□□□□□ -0.52
Upk2P38575 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Upk2P38575 Gm7730-201ENSMUST00000212486 454 ntBASIC11.8□□□□□ -0.52
Upk2P38575 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.8□□□□□ -0.52
Upk2P38575 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.8□□□□□ -0.52
Upk2P38575 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Upk2P38575 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Upk2P38575 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk2P38575 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk2P38575 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Upk2P38575 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Upk2P38575 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Upk2P38575 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk2P38575 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.79□□□□□ -0.52
Upk2P38575 Gm6218-201ENSMUST00000219812 628 ntBASIC11.79□□□□□ -0.52
Upk2P38575 Gm19220-201ENSMUST00000222682 803 ntBASIC11.79□□□□□ -0.52
Upk2P38575 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.79□□□□□ -0.52
Upk2P38575 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.79□□□□□ -0.52
Upk2P38575 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk2P38575 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.79□□□□□ -0.52
Upk2P38575 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk2P38575 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms