Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.42□□□□□ -0.26
LdlrP35951 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LdlrP35951 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.42□□□□□ -0.26
LdlrP35951 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.42□□□□□ -0.26
LdlrP35951 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LdlrP35951 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.42□□□□□ -0.26
LdlrP35951 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LdlrP35951 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
LdlrP35951 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
LdlrP35951 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LdlrP35951 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
LdlrP35951 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LdlrP35951 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.41□□□□□ -0.26
LdlrP35951 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.41□□□□□ -0.26
LdlrP35951 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LdlrP35951 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LdlrP35951 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.41□□□□□ -0.26
LdlrP35951 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.41□□□□□ -0.26
LdlrP35951 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.41□□□□□ -0.26
LdlrP35951 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.41□□□□□ -0.26
LdlrP35951 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.41□□□□□ -0.26
LdlrP35951 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.41□□□□□ -0.26
LdlrP35951 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
LdlrP35951 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LdlrP35951 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LdlrP35951 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.4□□□□□ -0.26
LdlrP35951 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.4□□□□□ -0.26
LdlrP35951 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LdlrP35951 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Gm12859-201ENSMUST00000117834 427 ntBASIC13.4□□□□□ -0.26
LdlrP35951 Gm14928-201ENSMUST00000120198 477 ntBASIC13.4□□□□□ -0.26
LdlrP35951 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.4□□□□□ -0.26
LdlrP35951 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.4□□□□□ -0.26
LdlrP35951 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.4□□□□□ -0.26
LdlrP35951 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.4□□□□□ -0.26
LdlrP35951 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LdlrP35951 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LdlrP35951 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.4□□□□□ -0.26
LdlrP35951 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.4□□□□□ -0.26
LdlrP35951 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.4□□□□□ -0.26
LdlrP35951 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.4□□□□□ -0.26
LdlrP35951 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.4□□□□□ -0.26
LdlrP35951 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LdlrP35951 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LdlrP35951 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LdlrP35951 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LdlrP35951 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
LdlrP35951 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LdlrP35951 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
LdlrP35951 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms