Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.8□□□□□ -0.2
Mmp13P33435 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Mmp13P33435 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.79□□□□□ -0.2
Mmp13P33435 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.79□□□□□ -0.2
Mmp13P33435 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Mmp13P33435 Gm14719-201ENSMUST00000121891 340 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.79□□□□□ -0.2
Mmp13P33435 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Gm5866-201ENSMUST00000177881 973 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 Gm27437-201ENSMUST00000183429 107 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Mmp13P33435 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.79□□□□□ -0.2
Mmp13P33435 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.79□□□□□ -0.2
Mmp13P33435 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Mmp13P33435 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Mmp13P33435 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.79□□□□□ -0.2
Mmp13P33435 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.79□□□□□ -0.2
Mmp13P33435 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Mmp13P33435 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Mmp13P33435 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.79□□□□□ -0.2
Mmp13P33435 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.78□□□□□ -0.2
Mmp13P33435 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Mmp13P33435 Gm15460-201ENSMUST00000118147 391 ntBASIC13.78□□□□□ -0.2
Mmp13P33435 Gm15393-201ENSMUST00000120499 219 ntBASIC13.78□□□□□ -0.2
Mmp13P33435 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.78□□□□□ -0.2
Mmp13P33435 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Mmp13P33435 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.78□□□□□ -0.2
Mmp13P33435 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.78□□□□□ -0.2
Mmp13P33435 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.78□□□□□ -0.2
Mmp13P33435 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.78□□□□□ -0.2
Mmp13P33435 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Mmp13P33435 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Mmp13P33435 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Mmp13P33435 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Mmp13P33435 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Mmp13P33435 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Mmp13P33435 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Mmp13P33435 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp13P33435 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp13P33435 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp13P33435 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp13P33435 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Mmp13P33435 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Mmp13P33435 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms