Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nedd8P29595 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Nedd8P29595 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nedd8P29595 Gm27357-201ENSMUST00000183754 135 ntBASIC12.4□□□□□ -0.42
Nedd8P29595 Gm27704-201ENSMUST00000185094 107 ntBASIC12.4□□□□□ -0.42
Nedd8P29595 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.4□□□□□ -0.42
Nedd8P29595 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.4□□□□□ -0.42
Nedd8P29595 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.4□□□□□ -0.42
Nedd8P29595 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nedd8P29595 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nedd8P29595 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Nedd8P29595 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nedd8P29595 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nedd8P29595 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nedd8P29595 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Nedd8P29595 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.39□□□□□ -0.43
Nedd8P29595 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.39□□□□□ -0.43
Nedd8P29595 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.39□□□□□ -0.43
Nedd8P29595 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nedd8P29595 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Gm16198-201ENSMUST00000118766 670 ntBASIC12.39□□□□□ -0.43
Nedd8P29595 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Nedd8P29595 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.39□□□□□ -0.43
Nedd8P29595 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nedd8P29595 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nedd8P29595 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.38□□□□□ -0.43
Nedd8P29595 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.38□□□□□ -0.43
Nedd8P29595 Gm15483-201ENSMUST00000120338 456 ntBASIC12.38□□□□□ -0.43
Nedd8P29595 Gm15173-201ENSMUST00000122049 433 ntBASIC12.38□□□□□ -0.43
Nedd8P29595 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.38□□□□□ -0.43
Nedd8P29595 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nedd8P29595 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.38□□□□□ -0.43
Nedd8P29595 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.38□□□□□ -0.43
Nedd8P29595 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nedd8P29595 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nedd8P29595 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms