Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm5370-201ENSMUST00000187187 574 ntBASIC13.4□□□□□ -0.26
Nckap1P28660 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.4□□□□□ -0.26
Nckap1P28660 Gm29705-201ENSMUST00000212598 474 ntBASIC13.4□□□□□ -0.26
Nckap1P28660 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nckap1P28660 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nckap1P28660 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.4□□□□□ -0.26
Nckap1P28660 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.4□□□□□ -0.26
Nckap1P28660 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nckap1P28660 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nckap1P28660 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.4□□□□□ -0.27
Nckap1P28660 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.39□□□□□ -0.27
Nckap1P28660 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.39□□□□□ -0.27
Nckap1P28660 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nckap1P28660 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm12403-201ENSMUST00000121384 959 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.39□□□□□ -0.27
Nckap1P28660 Gm42693-201ENSMUST00000196779 631 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.39□□□□□ -0.27
Nckap1P28660 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.39□□□□□ -0.27
Nckap1P28660 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.39□□□□□ -0.27
Nckap1P28660 Gm8598-201ENSMUST00000221184 836 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Nckap1P28660 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.39□□□□□ -0.27
Nckap1P28660 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nckap1P28660 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.38□□□□□ -0.27
Nckap1P28660 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nckap1P28660 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Nckap1P28660 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.38□□□□□ -0.27
Nckap1P28660 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.38□□□□□ -0.27
Nckap1P28660 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nckap1P28660 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.38□□□□□ -0.27
Nckap1P28660 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.38□□□□□ -0.27
Nckap1P28660 Gm27331-201ENSMUST00000183705 60 ntBASIC13.38□□□□□ -0.27
Nckap1P28660 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.38□□□□□ -0.27
Nckap1P28660 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.38□□□□□ -0.27
Nckap1P28660 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.38□□□□□ -0.27
Nckap1P28660 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.38□□□□□ -0.27
Nckap1P28660 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nckap1P28660 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms