Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col8a2P25318 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Gm13612-201ENSMUST00000119276 390 ntBASIC11.23□□□□□ -0.61
Col8a2P25318 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.23□□□□□ -0.61
Col8a2P25318 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.23□□□□□ -0.61
Col8a2P25318 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.23□□□□□ -0.61
Col8a2P25318 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.23□□□□□ -0.61
Col8a2P25318 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.23□□□□□ -0.61
Col8a2P25318 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.23□□□□□ -0.61
Col8a2P25318 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Gm10012-201ENSMUST00000078252 192 ntBASIC11.23□□□□□ -0.61
Col8a2P25318 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.23□□□□□ -0.61
Col8a2P25318 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Col8a2P25318 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col8a2P25318 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col8a2P25318 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col8a2P25318 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col8a2P25318 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col8a2P25318 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.22□□□□□ -0.61
Col8a2P25318 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col8a2P25318 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Col8a2P25318 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.22□□□□□ -0.61
Col8a2P25318 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.22□□□□□ -0.61
Col8a2P25318 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.22□□□□□ -0.61
Col8a2P25318 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Col8a2P25318 Gm44719-201ENSMUST00000206404 149 ntBASIC11.22□□□□□ -0.61
Col8a2P25318 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col8a2P25318 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.22□□□□□ -0.61
Col8a2P25318 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.22□□□□□ -0.61
Col8a2P25318 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.22□□□□□ -0.61
Col8a2P25318 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col8a2P25318 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.21□□□□□ -0.61
Col8a2P25318 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.21□□□□□ -0.61
Col8a2P25318 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Col8a2P25318 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.21□□□□□ -0.61
Col8a2P25318 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.21□□□□□ -0.61
Col8a2P25318 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.21□□□□□ -0.61
Col8a2P25318 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Col8a2P25318 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.21□□□□□ -0.61
Col8a2P25318 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms