Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.84□□□□□ -0.19
Rb1P13405 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.84□□□□□ -0.19
Rb1P13405 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rb1P13405 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.84□□□□□ -0.19
Rb1P13405 Gm6007-201ENSMUST00000208170 823 ntBASIC13.84□□□□□ -0.19
Rb1P13405 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.84□□□□□ -0.19
Rb1P13405 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rb1P13405 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rb1P13405 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Rb1P13405 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rb1P13405 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rb1P13405 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rb1P13405 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rb1P13405 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rb1P13405 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.83□□□□□ -0.19
Rb1P13405 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rb1P13405 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rb1P13405 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rb1P13405 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.83□□□□□ -0.2
Rb1P13405 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Rb1P13405 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.83□□□□□ -0.2
Rb1P13405 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Gm6244-201ENSMUST00000178732 841 ntBASIC13.83□□□□□ -0.2
Rb1P13405 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rb1P13405 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.83□□□□□ -0.2
Rb1P13405 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rb1P13405 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rb1P13405 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.82□□□□□ -0.2
Rb1P13405 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rb1P13405 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.82□□□□□ -0.2
Rb1P13405 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.82□□□□□ -0.2
Rb1P13405 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Rb1P13405 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rb1P13405 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rb1P13405 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rb1P13405 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.82□□□□□ -0.2
Rb1P13405 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.82□□□□□ -0.2
Rb1P13405 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.82□□□□□ -0.2
Rb1P13405 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rb1P13405 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rb1P13405 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rb1P13405 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rb1P13405 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.81□□□□□ -0.2
Rb1P13405 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.81□□□□□ -0.2
Rb1P13405 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Rb1P13405 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rb1P13405 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms