Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.42□□□□□ -0.74
Ccl1P10146 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.42□□□□□ -0.74
Ccl1P10146 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccl1P10146 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Ccl1P10146 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl1P10146 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Gm7461-201ENSMUST00000058918 827 ntBASIC10.41□□□□□ -0.74
Ccl1P10146 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccl1P10146 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl1P10146 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.4□□□□□ -0.74
Ccl1P10146 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.4□□□□□ -0.74
Ccl1P10146 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Ccl1P10146 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccl1P10146 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Gm7862-201ENSMUST00000121461 292 ntBASIC10.4□□□□□ -0.74
Ccl1P10146 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.4□□□□□ -0.74
Ccl1P10146 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccl1P10146 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl1P10146 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Ccl1P10146 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl1P10146 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl1P10146 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Ccl1P10146 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Ccl1P10146 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl1P10146 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl1P10146 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl1P10146 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl1P10146 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms