Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ly6c1P0CW02 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.3□□□□□ -0.6
Ly6c1P0CW02 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Gm45610-201ENSMUST00000209227 784 ntBASIC11.3□□□□□ -0.6
Ly6c1P0CW02 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC11.3□□□□□ -0.6
Ly6c1P0CW02 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ly6c1P0CW02 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gm12928-201ENSMUST00000117115 573 ntBASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.29□□□□□ -0.6
Ly6c1P0CW02 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms