Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hoxc9P09633 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc9P09633 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hoxc9P09633 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.3■□□□□ 0.36
Hoxc9P09633 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc9P09633 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.3■□□□□ 0.36
Hoxc9P09633 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.3■□□□□ 0.36
Hoxc9P09633 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hoxc9P09633 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hoxc9P09633 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc9P09633 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Hoxc9P09633 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc9P09633 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc9P09633 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.29■□□□□ 0.36
Hoxc9P09633 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hoxc9P09633 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hoxc9P09633 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.29■□□□□ 0.36
Hoxc9P09633 Gm11222-201ENSMUST00000119005 738 ntBASIC17.29■□□□□ 0.36
Hoxc9P09633 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Gm22121-201ENSMUST00000175148 54 ntBASIC17.29■□□□□ 0.36
Hoxc9P09633 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC17.29■□□□□ 0.36
Hoxc9P09633 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.29■□□□□ 0.36
Hoxc9P09633 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hoxc9P09633 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc9P09633 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.29■□□□□ 0.36
Hoxc9P09633 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc9P09633 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.28■□□□□ 0.36
Hoxc9P09633 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Gm25668-201ENSMUST00000157700 129 ntBASIC17.28■□□□□ 0.36
Hoxc9P09633 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hoxc9P09633 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc9P09633 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hoxc9P09633 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Hoxc9P09633 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms