Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.23□□□□□ -0.29
Hoxa4P06798 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hoxa4P06798 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa4P06798 Gm16372-201ENSMUST00000073088 450 ntBASIC13.23□□□□□ -0.29
Hoxa4P06798 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa4P06798 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
Hoxa4P06798 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hoxa4P06798 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Hoxa4P06798 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.23□□□□□ -0.29
Hoxa4P06798 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa4P06798 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hoxa4P06798 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa4P06798 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa4P06798 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.23□□□□□ -0.29
Hoxa4P06798 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa4P06798 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hoxa4P06798 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Gm14350-201ENSMUST00000116642 640 ntBASIC13.22□□□□□ -0.29
Hoxa4P06798 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Proscos-202ENSMUST00000178990 666 ntBASIC13.22□□□□□ -0.29
Hoxa4P06798 Gm8652-201ENSMUST00000181363 964 ntBASIC13.22□□□□□ -0.29
Hoxa4P06798 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxa4P06798 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.22□□□□□ -0.29
Hoxa4P06798 Gm8598-201ENSMUST00000221184 836 ntBASIC13.22□□□□□ -0.29
Hoxa4P06798 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hoxa4P06798 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxa4P06798 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxa4P06798 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa4P06798 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.21□□□□□ -0.29
Hoxa4P06798 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Gm17150-201ENSMUST00000165577 381 ntBASIC13.21□□□□□ -0.29
Hoxa4P06798 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.21□□□□□ -0.29
Hoxa4P06798 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.21□□□□□ -0.29
Hoxa4P06798 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.21□□□□□ -0.29
Hoxa4P06798 Gm44069-201ENSMUST00000204898 506 ntBASIC13.21□□□□□ -0.29
Hoxa4P06798 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.21□□□□□ -0.29
Hoxa4P06798 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.21□□□□□ -0.29
Hoxa4P06798 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Hoxa4P06798 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa4P06798 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa4P06798 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa4P06798 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.21□□□□□ -0.3
Hoxa4P06798 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa4P06798 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.21□□□□□ -0.3
Hoxa4P06798 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa4P06798 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa4P06798 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa4P06798 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa4P06798 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa4P06798 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa4P06798 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa4P06798 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa4P06798 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa4P06798 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms