Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12□□□□□ -0.49
P06344 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
P06344 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06344 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06344 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12□□□□□ -0.49
P06344 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P06344 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P06344 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.99□□□□□ -0.49
P06344 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.99□□□□□ -0.49
P06344 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.99□□□□□ -0.49
P06344 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.99□□□□□ -0.49
P06344 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.99□□□□□ -0.49
P06344 Gm6244-201ENSMUST00000178732 841 ntBASIC11.99□□□□□ -0.49
P06344 Gm27892-201ENSMUST00000185017 106 ntBASIC11.99□□□□□ -0.49
P06344 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.99□□□□□ -0.49
P06344 Gm42550-201ENSMUST00000201553 960 ntBASIC11.99□□□□□ -0.49
P06344 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.99□□□□□ -0.49
P06344 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
P06344 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P06344 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.99□□□□□ -0.49
P06344 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06344 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
P06344 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P06344 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.98□□□□□ -0.49
P06344 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
P06344 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.98□□□□□ -0.49
P06344 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.98□□□□□ -0.49
P06344 Mir1894-201ENSMUST00000122802 81 ntBASIC11.98□□□□□ -0.49
P06344 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.98□□□□□ -0.49
P06344 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.98□□□□□ -0.49
P06344 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
P06344 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06344 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.97□□□□□ -0.49
P06344 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
P06344 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
P06344 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P06344 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P06344 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
P06344 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.97□□□□□ -0.49
P06344 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06344 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.97□□□□□ -0.49
P06344 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms