Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.62□□□□□ -0.23
PdgfrbP05622 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PdgfrbP05622 Gm17330-201ENSMUST00000221047 165 ntBASIC13.62□□□□□ -0.23
PdgfrbP05622 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PdgfrbP05622 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.62□□□□□ -0.23
PdgfrbP05622 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PdgfrbP05622 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.61□□□□□ -0.23
PdgfrbP05622 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm12403-201ENSMUST00000121384 959 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm5354-201ENSMUST00000182417 973 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PdgfrbP05622 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
PdgfrbP05622 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.61□□□□□ -0.23
PdgfrbP05622 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.61□□□□□ -0.23
PdgfrbP05622 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.61□□□□□ -0.23
PdgfrbP05622 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfrbP05622 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PdgfrbP05622 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.6□□□□□ -0.23
PdgfrbP05622 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PdgfrbP05622 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.6□□□□□ -0.23
PdgfrbP05622 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.6□□□□□ -0.23
PdgfrbP05622 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
PdgfrbP05622 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.6□□□□□ -0.23
PdgfrbP05622 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.6□□□□□ -0.23
PdgfrbP05622 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Gm5161-201ENSMUST00000075243 853 ntBASIC13.6□□□□□ -0.23
PdgfrbP05622 Gm24447-201ENSMUST00000083977 338 ntBASIC13.6□□□□□ -0.23
PdgfrbP05622 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
PdgfrbP05622 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
PdgfrbP05622 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PdgfrbP05622 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.6□□□□□ -0.23
PdgfrbP05622 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.6□□□□□ -0.23
PdgfrbP05622 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfrbP05622 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfrbP05622 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfrbP05622 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfrbP05622 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfrbP05622 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms