Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P01728 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
P01728 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.54□□□□□ -0.72
P01728 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
P01728 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.53□□□□□ -0.72
P01728 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
P01728 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
P01728 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.53□□□□□ -0.72
P01728 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Matn2-203ENSMUST00000226766 3252 ntBASIC10.53□□□□□ -0.72
P01728 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.53□□□□□ -0.72
P01728 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.53□□□□□ -0.72
P01728 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.53□□□□□ -0.72
P01728 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.53□□□□□ -0.72
P01728 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.53□□□□□ -0.72
P01728 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.53□□□□□ -0.72
P01728 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Gm45612-201ENSMUST00000211320 160 ntBASIC10.53□□□□□ -0.72
P01728 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.53□□□□□ -0.72
P01728 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.53□□□□□ -0.72
P01728 Psmb5-202ENSMUST00000227257 622 ntBASIC10.53□□□□□ -0.72
P01728 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
P01728 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
P01728 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P01728 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.53□□□□□ -0.72
P01728 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P01728 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P01728 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01728 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
P01728 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.52□□□□□ -0.72
P01728 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.52□□□□□ -0.72
P01728 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.52□□□□□ -0.72
P01728 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.52□□□□□ -0.72
P01728 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
P01728 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.52□□□□□ -0.72
P01728 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01728 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
P01728 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P01728 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P01728 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01728 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01728 Gm5566-201ENSMUST00000116118 459 ntBASIC10.52□□□□□ -0.73
P01728 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.52□□□□□ -0.73
P01728 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.52□□□□□ -0.73
P01728 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.52□□□□□ -0.73
P01728 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.52□□□□□ -0.73
P01728 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.52□□□□□ -0.73
P01728 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
P01728 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.52□□□□□ -0.73
P01728 Dupd1-202ENSMUST00000224735 548 ntBASIC10.52□□□□□ -0.73
P01728 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.52□□□□□ -0.73
P01728 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01728 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01728 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
P01728 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.52□□□□□ -0.73
P01728 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P01728 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01728 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
P01728 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms