Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.92□□□□□ -0.34
Hcn1O88704 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hcn1O88704 Gm7063-201ENSMUST00000186840 981 ntBASIC12.92□□□□□ -0.34
Hcn1O88704 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.92□□□□□ -0.34
Hcn1O88704 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Syt7-205ENSMUST00000224135 1557 ntBASIC12.92□□□□□ -0.34
Hcn1O88704 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.92□□□□□ -0.34
Hcn1O88704 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hcn1O88704 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.92□□□□□ -0.34
Hcn1O88704 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hcn1O88704 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hcn1O88704 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hcn1O88704 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Hcn1O88704 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.91□□□□□ -0.34
Hcn1O88704 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.91□□□□□ -0.34
Hcn1O88704 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.91□□□□□ -0.34
Hcn1O88704 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.91□□□□□ -0.34
Hcn1O88704 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.91□□□□□ -0.34
Hcn1O88704 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.91□□□□□ -0.34
Hcn1O88704 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.91□□□□□ -0.34
Hcn1O88704 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Hcn1O88704 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Hcn1O88704 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hcn1O88704 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hcn1O88704 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.9□□□□□ -0.34
Hcn1O88704 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Hcn1O88704 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hcn1O88704 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.9□□□□□ -0.34
Hcn1O88704 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.9□□□□□ -0.34
Hcn1O88704 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Hcn1O88704 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hcn1O88704 Gm4804-201ENSMUST00000182234 999 ntBASIC12.9□□□□□ -0.34
Hcn1O88704 Gm10766-202ENSMUST00000194123 606 ntBASIC12.9□□□□□ -0.34
Hcn1O88704 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.9□□□□□ -0.34
Hcn1O88704 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.9□□□□□ -0.34
Hcn1O88704 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hcn1O88704 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hcn1O88704 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hcn1O88704 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hcn1O88704 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Hcn1O88704 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Gm22189-201ENSMUST00000103822 86 ntBASIC12.89□□□□□ -0.35
Hcn1O88704 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Gm7488-201ENSMUST00000117148 684 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms