Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Gm17794-201ENSMUST00000220252 955 ntBASIC12.21□□□□□ -0.45
Lmx1bO88609 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.21□□□□□ -0.45
Lmx1bO88609 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.21□□□□□ -0.45
Lmx1bO88609 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Lmx1bO88609 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lmx1bO88609 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.21□□□□□ -0.46
Lmx1bO88609 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lmx1bO88609 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Lmx1bO88609 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lmx1bO88609 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lmx1bO88609 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lmx1bO88609 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lmx1bO88609 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lmx1bO88609 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Lmx1bO88609 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.2□□□□□ -0.46
Lmx1bO88609 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Gm7287-201ENSMUST00000205267 602 ntBASIC12.2□□□□□ -0.46
Lmx1bO88609 Gm6983-201ENSMUST00000214912 628 ntBASIC12.2□□□□□ -0.46
Lmx1bO88609 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lmx1bO88609 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmx1bO88609 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Lmx1bO88609 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lmx1bO88609 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Lmx1bO88609 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lmx1bO88609 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lmx1bO88609 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.19□□□□□ -0.46
Lmx1bO88609 Gm8652-201ENSMUST00000181363 964 ntBASIC12.19□□□□□ -0.46
Lmx1bO88609 Gm27486-201ENSMUST00000184923 80 ntBASIC12.19□□□□□ -0.46
Lmx1bO88609 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.19□□□□□ -0.46
Lmx1bO88609 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Lmx1bO88609 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.19□□□□□ -0.46
Lmx1bO88609 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmx1bO88609 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms