Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm9229-201ENSMUST00000222777 126 ntBASIC12.86□□□□□ -0.35
Vti1bO88384 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.86□□□□□ -0.35
Vti1bO88384 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1bO88384 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vti1bO88384 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.85□□□□□ -0.35
Vti1bO88384 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.85□□□□□ -0.35
Vti1bO88384 Gm33320-201ENSMUST00000192232 530 ntBASIC12.85□□□□□ -0.35
Vti1bO88384 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.85□□□□□ -0.35
Vti1bO88384 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.85□□□□□ -0.35
Vti1bO88384 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.85□□□□□ -0.35
Vti1bO88384 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.85□□□□□ -0.35
Vti1bO88384 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1bO88384 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.84□□□□□ -0.35
Vti1bO88384 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.84□□□□□ -0.35
Vti1bO88384 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vti1bO88384 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.84□□□□□ -0.35
Vti1bO88384 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.84□□□□□ -0.35
Vti1bO88384 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.84□□□□□ -0.35
Vti1bO88384 Gm9063-201ENSMUST00000223299 582 ntBASIC12.84□□□□□ -0.35
Vti1bO88384 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vti1bO88384 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vti1bO88384 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vti1bO88384 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vti1bO88384 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Vti1bO88384 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.84□□□□□ -0.35
Vti1bO88384 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.84□□□□□ -0.35
Vti1bO88384 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.84□□□□□ -0.35
Vti1bO88384 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vti1bO88384 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vti1bO88384 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vti1bO88384 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vti1bO88384 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms