Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
NlkO54949 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.04□□□□□ -0.48
NlkO54949 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
NlkO54949 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.04□□□□□ -0.48
NlkO54949 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NlkO54949 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.04□□□□□ -0.48
NlkO54949 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
NlkO54949 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.04□□□□□ -0.48
NlkO54949 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.04□□□□□ -0.48
NlkO54949 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.04□□□□□ -0.48
NlkO54949 Gm43575-201ENSMUST00000196420 516 ntBASIC12.04□□□□□ -0.48
NlkO54949 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Gm18049-201ENSMUST00000208909 581 ntBASIC12.04□□□□□ -0.48
NlkO54949 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NlkO54949 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.04□□□□□ -0.48
NlkO54949 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NlkO54949 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.04□□□□□ -0.48
NlkO54949 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NlkO54949 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.04□□□□□ -0.48
NlkO54949 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.03□□□□□ -0.48
NlkO54949 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Gm23935-201ENSMUST00000102303 57 ntBASIC12.03□□□□□ -0.48
NlkO54949 Gm24270-201ENSMUST00000102326 57 ntBASIC12.03□□□□□ -0.48
NlkO54949 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.03□□□□□ -0.48
NlkO54949 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Gm24245-201ENSMUST00000157318 57 ntBASIC12.03□□□□□ -0.48
NlkO54949 Gm26308-201ENSMUST00000157768 69 ntBASIC12.03□□□□□ -0.48
NlkO54949 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Gm24158-201ENSMUST00000175263 71 ntBASIC12.03□□□□□ -0.48
NlkO54949 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.03□□□□□ -0.48
NlkO54949 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.03□□□□□ -0.48
NlkO54949 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NlkO54949 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.03□□□□□ -0.48
NlkO54949 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.03□□□□□ -0.48
NlkO54949 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NlkO54949 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
NlkO54949 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NlkO54949 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
NlkO54949 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.02□□□□□ -0.48
NlkO54949 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NlkO54949 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NlkO54949 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
NlkO54949 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
NlkO54949 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.02□□□□□ -0.48
NlkO54949 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NlkO54949 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
NlkO54949 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NlkO54949 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NlkO54949 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NlkO54949 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NlkO54949 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NlkO54949 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NlkO54949 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NlkO54949 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NlkO54949 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.02□□□□□ -0.49
NlkO54949 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms