Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FxnO35943 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FxnO35943 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FxnO35943 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
FxnO35943 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FxnO35943 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FxnO35943 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.62□□□□□ -0.39
FxnO35943 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
FxnO35943 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.62□□□□□ -0.39
FxnO35943 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.62□□□□□ -0.39
FxnO35943 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.62□□□□□ -0.39
FxnO35943 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.62□□□□□ -0.39
FxnO35943 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FxnO35943 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FxnO35943 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.61□□□□□ -0.39
FxnO35943 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
FxnO35943 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.61□□□□□ -0.39
FxnO35943 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.61□□□□□ -0.39
FxnO35943 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.61□□□□□ -0.39
FxnO35943 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.61□□□□□ -0.39
FxnO35943 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FxnO35943 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FxnO35943 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Gm43703-201ENSMUST00000200523 763 ntBASIC12.61□□□□□ -0.39
FxnO35943 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
FxnO35943 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FxnO35943 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FxnO35943 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.61□□□□□ -0.39
FxnO35943 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FxnO35943 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.6□□□□□ -0.39
FxnO35943 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.6□□□□□ -0.39
FxnO35943 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
FxnO35943 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.6□□□□□ -0.39
FxnO35943 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms