Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.99□□□□□ -0.17
Ebf3O08791 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.99□□□□□ -0.17
Ebf3O08791 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.99□□□□□ -0.17
Ebf3O08791 Gm40466-201ENSMUST00000212174 422 ntBASIC13.99□□□□□ -0.17
Ebf3O08791 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.99□□□□□ -0.17
Ebf3O08791 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Ebf3O08791 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ebf3O08791 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf3O08791 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.98□□□□□ -0.17
Ebf3O08791 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.98□□□□□ -0.17
Ebf3O08791 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.98□□□□□ -0.17
Ebf3O08791 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm42550-201ENSMUST00000201553 960 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.98□□□□□ -0.17
Ebf3O08791 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.98□□□□□ -0.17
Ebf3O08791 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.98□□□□□ -0.17
Ebf3O08791 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ebf3O08791 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ebf3O08791 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.97□□□□□ -0.17
Ebf3O08791 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ebf3O08791 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.97□□□□□ -0.17
Ebf3O08791 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.97□□□□□ -0.17
Ebf3O08791 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Gm27572-201ENSMUST00000183702 255 ntBASIC13.97□□□□□ -0.17
Ebf3O08791 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.97□□□□□ -0.17
Ebf3O08791 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.97□□□□□ -0.17
Ebf3O08791 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.97□□□□□ -0.17
Ebf3O08791 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.97□□□□□ -0.17
Ebf3O08791 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.97□□□□□ -0.17
Ebf3O08791 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ebf3O08791 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms