Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Gm22121-201ENSMUST00000175148 54 ntBASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Gm3786-201ENSMUST00000202659 378 ntBASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Nsd1-205ENSMUST00000224693 852 ntBASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
B020004C17RikJ3QP07 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm43138-201ENSMUST00000199123 708 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm18212-201ENSMUST00000211678 889 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
B020004C17RikJ3QP07 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
B020004C17RikJ3QP07 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms