Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shisa8J3QNX5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shisa8J3QNX5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Rprl2-201ENSMUST00000157150 290 ntBASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms