Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Gm6458-201ENSMUST00000211573 635 ntBASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Morn2-202ENSMUST00000227729 656 ntBASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Mir433-201ENSMUST00000093564 124 ntBASIC16.19■□□□□ 0.18
Sh3tc1G3X9F6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Gm25668-201ENSMUST00000157700 129 ntBASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh3tc1G3X9F6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Gm11978-201ENSMUST00000122315 466 ntBASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sh3tc1G3X9F6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms