Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm28043E0CXC2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.52□□□□□ -0.25
Gm28043E0CXC2 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm28043E0CXC2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm13453-201ENSMUST00000118708 357 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm6888-201ENSMUST00000221983 706 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gm28043E0CXC2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm13223-201ENSMUST00000118609 747 ntBASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm27321-201ENSMUST00000185021 205 ntBASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm38294-201ENSMUST00000192831 381 ntBASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm44344-201ENSMUST00000200287 129 ntBASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm6916-202ENSMUST00000205523 195 ntBASIC13.5□□□□□ -0.25
Gm28043E0CXC2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms