Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm15240-201ENSMUST00000118156 720 ntBASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm11918-201ENSMUST00000121660 179 ntBASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm27772-201ENSMUST00000184900 187 ntBASIC12.2□□□□□ -0.46
Gm3543D3Z235 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm45384-201ENSMUST00000210451 277 ntBASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm9908-201ENSMUST00000211534 448 ntBASIC12.2□□□□□ -0.46
Gm3543D3Z235 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.2□□□□□ -0.46
Gm3543D3Z235 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm3543D3Z235 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.19□□□□□ -0.46
Gm3543D3Z235 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.19□□□□□ -0.46
Gm3543D3Z235 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.19□□□□□ -0.46
Gm3543D3Z235 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.19□□□□□ -0.46
Gm3543D3Z235 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.19□□□□□ -0.46
Gm3543D3Z235 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm3543D3Z235 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Gm12341-201ENSMUST00000119724 503 ntBASIC12.18□□□□□ -0.46
Gm3543D3Z235 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms