Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Pck2-205ENSMUST00000226352 2784 ntBASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm12887B1AVM1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Mir874-201ENSMUST00000104769 76 ntBASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm12887B1AVM1 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Gm15678-201ENSMUST00000117573 960 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Mir8098-201ENSMUST00000184011 137 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms