Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Gm8018-201ENSMUST00000173536 789 ntBASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Gm26361-201ENSMUST00000158868 186 ntBASIC13.55□□□□□ -0.24
Col4a6B1AVK5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Col4a6B1AVK5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.54□□□□□ -0.24
Col4a6B1AVK5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Gm11331-201ENSMUST00000119764 288 ntBASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.54□□□□□ -0.24
Col4a6B1AVK5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm11628-201ENSMUST00000117568 171 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm5523-201ENSMUST00000180415 997 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm27023-201ENSMUST00000182372 285 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm37666-201ENSMUST00000194110 866 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col4a6B1AVK5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms