Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm11127A7VMS2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.93□□□□□ -0.5
Gm11127A7VMS2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm11127A7VMS2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Syt7-205ENSMUST00000224135 1557 ntBASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm11127A7VMS2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm11127A7VMS2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm11127A7VMS2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms