Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Gm13286-201ENSMUST00000117750 537 ntBASIC10.78□□□□□ -0.68
Chd6A3KFM7 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Rprl1-202ENSMUST00000198476 238 ntBASIC10.78□□□□□ -0.68
Chd6A3KFM7 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.78□□□□□ -0.68
Chd6A3KFM7 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.78□□□□□ -0.68
Chd6A3KFM7 AC134537.1-201ENSMUST00000219205 265 ntBASIC10.78□□□□□ -0.68
Chd6A3KFM7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.78□□□□□ -0.68
Chd6A3KFM7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.78□□□□□ -0.68
Chd6A3KFM7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd6A3KFM7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chd6A3KFM7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd6A3KFM7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC10.77□□□□□ -0.68
Chd6A3KFM7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chd6A3KFM7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.77□□□□□ -0.68
Chd6A3KFM7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.77□□□□□ -0.68
Chd6A3KFM7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Chd6A3KFM7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.77□□□□□ -0.69
Chd6A3KFM7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Mir6941-201ENSMUST00000184711 59 ntBASIC10.77□□□□□ -0.69
Chd6A3KFM7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.77□□□□□ -0.69
Chd6A3KFM7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.77□□□□□ -0.69
Chd6A3KFM7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd6A3KFM7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.76□□□□□ -0.69
Chd6A3KFM7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.76□□□□□ -0.69
Chd6A3KFM7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms